From the College of Physicians and Surgeons document that is causing all the upset:
• The right to freedom of religion is not unlimited; it is subject to such limitations as are necessary to protect public safety, order, health, morals or the fundamental rights or freedoms of others;
And doctors don't just have to abide by the Ontario Human Rights Code. The College itself might get on their case for professional misconduct. When refusing to treat a patient on account of their (the physician's) religious beliefs, for example, doctors must:
• Provide information about all clinical options that may be available or appropriate based on the patient’s clinical needs or concerns. Physicians must not withhold information about the existence of a procedure or treatment because providing that procedure or giving advice about it conflicts with their religious or moral beliefs.
And what of it? Flanders seems to feel it would be okay for a doctor to lie in the name of the Bearded Sky-Monster. Why? The law is the law. Everyone else has to obey it.